I had a pelvic ultrasound done and trans vag. As well. It showed a fibroid, and a cyst on my right ovary. My left ovary was not visible. Is this bad?

Not necessarily. The ovary may have been obscured by bowel overlying the expected position of the ovary. It is not rare to be unable to locate an ovary, especially in the woman in menopause . Sometimes obesity may be a factor.